Browse of TCMCG057C49842 protein

CDS

Accession Number	TCMCG057C49842
gbkey	CDS
Protein Id	XP_018456147.1
Location	complement(join(23893001..23893450,23893550..23893865,23893979..23896579,23896682..23898978,23899064..23899408,23899494..23899640,23899918..23900022,23900144..23900197,23900288..23900356,23900554..23900659,23900789..23900848,23900935..23901053))
Gene	LOC108827266
GeneID	108827266
Organism	Raphanus sativus

Protein

Length	2222aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018600645.1
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 12 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Mediator of RNA polymerase II transcription subunit 12-like
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006351        [VIEW IN EMBL-EBI] GO:0006352        [VIEW IN EMBL-EBI] GO:0006366        [VIEW IN EMBL-EBI] GO:0006367        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016592        [VIEW IN EMBL-EBI] GO:0018130        [VIEW IN EMBL-EBI] GO:0019438        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032774        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034645        [VIEW IN EMBL-EBI] GO:0034654        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044249        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044271        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097659        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901362        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAAAGGTATCATCCTGCAAACTGCACTAGTGCAGTCAATAATAGCGCTGTAGGTGGTGGTGGTTCATCAGGACGATCTGATTCCTCTTCTGTTGGAAACTACTCCCTTAACTCCAGGAGGCCACCACCGTTGACACCCTACAAGTTGAAGTGTGAAAAGGACGGTCTCAACTCCCGACTTGGACCGCCTGATTTTCATCCTCCAACATCAACTTCTCCCGAAGAGAACCTAACCAAAGAGTATGCTCAGTCTGGATACAAGGAAACTGTTGATGGACTTAAGGAAGCCGAAGAGATTATATTGACTCATGTCCATACTTTTTCCAAGCCTGTTGTCATAAAGTGCAAAGAGGCTGTCAGAAAGTGTTTTAGAGCTATCAATGAGTCTCGTGCACTGAAGCGCAAGGCTGGTCAGGTTTACGGGGTGCCTCTCTCCGGTTCGCTTCTATGTAAGCCTGGATTCCCAGAACAAAGATCATGTGGGGAGGAGACGAAGAAAAAATGGATTGAGAGTTTATCACAACAGCACAAGCGATTACGCTCTTTGGCTGATAACGTTCCTGGATTTAAGAGAAACACCTTATTTGAAGTCCTCATAAGGAACAATGTTCCGTTACCGAGAGCTACTTGGTTTATAAAAGTGACTTATCTTAACCAGGTGCGACCTAGTTCCGCGTCTATTTTTTCAGGGACACCTGACAAAACACAAACTACTCGGTGTGAGCAATGGACAAAAGATGTTATTGACTACCTGCAATACCTTTTGAATGAACTTTTGTCACGGAATAATTCATATCCTTCTCAGCAAACTAGAGATAGGTCGCCCCAGATGCTTTATACAGGATCAGTTCAAAAGATAAGTCCAGCATCAGCAAGTCTTTACGGTGAGGAAACATCTCTGCATTTTAAGTGGTGGTATATGGTGCGTCTTCTACAGTGGCACCTTGCTGAGGGGCTTCTTCTTCCTAATCTCATTGTTGATTGGGTTCTCAGACTCTTACAGGAAAAAGAGGTCTTTGAAACTTTGCAGTTGCTACTCCCCATTGTATATGGTGTTTTAGAGAGCATTGTTCTCTCTCAGACATATGTGCAGAATCTTGTAGCTATTGCTGTCCGTTTCATCCAAGAACCTGCTCCTGGTGGATCCGATCTTGTTGATAACTCCCGAAGAGCCTATACTCTCTCTGCTTTAACTGAAATGGTTCGCTACTTGGTATTGGCTGCACCCGACACATTTGTTGCTTCAGATTGCTTTCCACTACCTCCTTCCATAGCAGCATGTGGACCCAATGACGTGAGCTATGCATCAAAAGCATATGAGAATCTGGAAAAGCTGAGAAGTAATTCTGCAGAGATTTCTACCCAATTTCAAGGGAGAGGAGTTGATTCTCGTTTTGAGTTTCTTTCTTTTGATTATACCATTTCAACGGTTCAGAGAACTGCAGATGATTTGGCAAAGATAGCTAGCGCTGGTTATCCTCAACATAACGGGGCTAAAGCTGTTCAGGCATTGGATAAAGCTTTATCGGACGGAGATATCAGAGCTGCTTACTGTTATCTCTTTGAAGACCTCTGCAACGGAGCCGTCGAGGAGACCTGGATTGCTGAAGTCAGTCCATGCTTAAGAACATCGCTTAGATGGATAGGGGCTATTAGCACATCCTTTGTTTGCTCTGTCTTTTTCCTTATTGAATGGGCGACATGTGATTTTAGAGACTTCCGGGATGGTGTGCCTAAAGATATCAAGTTCTCTGGCAGAAAAGATTGTTCTCAGGTGCATTTAGTCATTCAGCTTCTGAAGCAAAAAAGTCTGGGTGGGAAATTTGCAGCTCGCAGAGGAAAGAACCATCACAGCAATTTTCTTGGTGTTTCTAAACCTAACGGGTCGATGGATCCATTTGAAAGTCCGGGAGCGTTACATGATATCATAGTCTGTTGGATTGATCAGCACGAGGTACACAGGGGTGGAGCAAAGCGCTTTCAGTTACTCGTTTTTGAACTTATACGTTCTGGAATCTTTAATCCCATAGCATACGTGAGACAACTCATACTTAGTGGCATGATTGATGTGATTCAACCTGCTGCTGATCCTGAAAGGAGATTGAGACATCATCGCATACTGAAACAGCTACCTGGTTCTTTTGTACATGACATCTTAGAGGAAGCACAACTTTTAGGAGGATATAAGCTTTCTGAGGCTGTGAGAATATATTCAAATGAACGGCGCCTTCTTCTGCGAGAATTGCTTGTTGGTAAACGTAAACATTTCCTGTCAGATCAGAAGTCTAAGAAAAAATCCACTTCATTTCCGTTGGTTGATTTGCCAAGGACGTTTGATGCCATGGGAGATAATGAAGGACTTCGAAAACATACCAAGAGCAGTGTAGATATTAGAGAACTGAAGGAGCGCATAGCAACCGTGTTACAGTTTCCCCGTATGTCCTCCGGCGTGACAAACCCAGTGCCAGATGAATGTCAAAGTAGTGTTAAGGGATCAAGTGGATCTGTGTATAGCAAGGTGGATCAACTAGAAGCTACACCAGGGTGTGAAGACTGTAGAAAATCAAAAAGGCCGAAAATGGATGATGAAAAGAGCTCTTGGAGTTCACCAATTATATCAGATGAAGAAGATAACTGGTGGATCAAAAAGGGATTGAAAACAGTGGAACCTTCTCTGAAGGTTGATCCTCCGCTAGAGTTGACTAAACAAGTACCGAGGGGTAGGCAGAAGATGGGGCGTAAAACACAATCTCTGGCTCAACTACAAGCTACTAGGATTGAAGGTAGCCAGGGCACTTCAACGAGTCTTGTTTGTGATAGTAAAGTAAGCTGTCCTCATCATGGCCTTGGAGTGGAAGGAGAAAACCATTGGGTGGTTGATGTGTTTAGAACTTCTACCCCTGTGGATATTGTATCTGTTGGAAACTCTTTGAAGCAGCTACAGTTTGTTGATAAGCGGTCTATTGCGGTTTGGCTTACAACTGTGGTTCGGCAACTTGTTGAAGAGTCCGAAAAGAGCAGTGTGAGAGTTGGGCAGTTCAACAAAGCTGCTCCAGTTGAAGAGAGTAGGACAACTAGGTGGAAGCTTAGGGCAGACGAGCTATCTGCCATATTATTTCTCATGGATCTCTCTCTGGATTTGGTTTTAGTGGTTAAATTTCTTCTTTGGTTATTGCCAAAGGGCAACAGTAGTCCAAATTTTGCCTTTCAAGGTGGGAGAAACCTTCTGGTTATGCCAAGGGATGTTGAAAACAACACGTATGAAGTAGGGGAAGCTATTCTAGTATCATCACTTAGGAGGTATGAAAATATTCTACTTTCAGCAGATCTTATTCCTGAGACCATGACAGCTTTGATGGCACGTGCTGCGTCACTTATGTCCAGTAGTGGAAAGATTTCTGGATCAGCTGCCTTAGTTTATGCTCGCTATATTTTGAAAAGATATGGAAGCCTTCCCAGTGTGGTGGAATGGCATAGCAGTTTCAAAGCAACATGTGAAAAGAGACTTCTTTCTGAACTTGATCATACGCGACCAGGAAACAGTGAGTATGGAATTCCCCTTGGGGTTCCAGCAGGAGTAGATAATCCAGATGAGTATTTACGTAAAAAAATCACTCGTCCTTCAAGAGTGGGCTTGACTATGAGAGAAGGTGTGCAACGCAAAGTTGAAGAGGCAACTCAGTATCTCAGAAAACTCATGGGTACTGGTACCATGAAAGCCCCACCTGCTGAGAAGAATGATTACGGGTATCAGGTGGCCCAACAAATTGTAGTTGGGCTAATGGACTGCATTAGACAGACTGGCGGTGCAGCTCAAGAGGGTGATCCCTCTTTGGTTTCTTCTGCGGTTTCTGCAATAATAAACAGTATAGGGATTTCCATGGCGAAGAATTCAGATCTCTCTGTTCATCAGAATCATCCATCTGGCGTAGGTTCATCTAATATCGCACGATATGTTTTGCAAATCCATATAACCTGTCTGTGCCTCTTGAAGGAAGCTCTTGGAGAGCGTCAAAGCCGCGTGTTTGAAATAGCGCTTGCAACAGAAAGTTCCACTGCTCTTTCTGGAGCCTTCGCCCCTGTGAAGGGATCCCGAAGTCAGCATCAGCTATCTCCTGAATCCTATGATTCAAATGCGAACATTACCACAAGTGATATGTCGAATGGTACTGGAAAAATACCGCTGAGCAGAGGAACAAAAGTTACTGCAGCTGTATCTGCACTTGTTATAGGTGCTATCACGCATGGCGTTATAACCCTTGAGAGGATCGTTGGTTTGCTGAGACTAAGGGAGTACTTAGATTTTGTTCAGTTTGTAAGGCGTACAAAATCGAGTTCTAATGGCAGTGCTAGGTCCGTGGGAGCCTCTAAAATGGAAAACCCTGTTGAAGTTTATGTTCATTGGTTCAGACTTCTTGTTGGTAATTGCAAAACTGTTTCGGAAGGGCTTGTCTTGGAGCTTGTGGGAGAATCTTCCGTGGTGGCTGTATCGCGTATGCAGCGCATGCTTCCGCTTAAATTGGTCTTCCCACCAGCGTATTCTATTCTTGCTTTTGTTCTGTGGAGGCCTTTTGTTTCGAATGGCAACTCTAACTCCGGCGTCCATGATGACACTCACCGCCTTTATCAGTCTTTAACAATGGCCTTCCATGATGTGATCAAACACCTTCCTTTCCGAGATGTGTGTTTGAGAGATACTCAGGGACTTTATGAACTGATAGTTGCTGATTCCACAGACGCTGAGTTTGCATCGGTACTGGAGTTGAATGGTTTGGATATGCACCTGAAAGCTGTGGCCTTTGCTCCTCTTCGTGCACGTCTTTTCCTAAATTCATTAATCGATTGTAAGGTGCCATCCTGTGGTTACTCCCACGAAGGAGTTAGTGAAGCAAAAAACCGACACCAGGGAAATGGAACAAGTCTTGTGGACAAGCTCGTATCTGTATTAGACTCCCTTCAACCTGCAAAGTTTCACTGGCAGTGGGTTGAACTCAGGCTGCTTCTAAACGAACAAGCACTTACTGAGAAACTTGAAAATCATGATATGCCGTTGACAGATGCAATACGATCTTCCTGTCCTACCTCCGAGAAGTCTGAAGCCTCTGAGAATGAGAAAAATTTCATTCAAATCCTCCTCACAAGGTTATTAGTGAGACCTGATGCGGTTCCACTTTTCTCGGAAGTGGTTCATCTCTTCGGTAGATCGGTTGAGGAGTCAATGCTGAAGCAAGCTGAATGGTTTCTAGCAGGTCACGATGTTCTTTTTGGACGGAAAACAATCAGACAAAAGCTGATTATAGTAGGTGAAAGCAAAGGACTTCCGACGAAACCTCAGTTTTGGAAACCTTGGGGTTGGTGCAGTAACTCCAGTTCTGATCCTATCATGGGAAACAAGACAGCAGGAGGGAAGAAAAGGAAGTTGGAGACTGTTGCTTCTATGGAAGAAGGAGAAGTGATCGAAGAAGGGTTGGGTTCAAAAAAGTTATTATTAGATGAGAAGAATCGGCTCAGTGTTGGCTTTGGCTATGGGGTTACGACGGAGAGGGCTTTTGTTAAGCTAGTGCTACCATGCATAGATCAAAGCTCTGATGAATCTAGAAGTACCTTTGTGAATGAGTTGGTAAGGCAGTTTAGCAATATTGAGCAGCAGTTAAGTTCTGTTACCAACCGCAGTAGTATAACAAACACTAAACACATGGGAACTGCTTCATCCGGGTCTGAGGTTTCATCAAGTAAAGGAAGTACTCGGAAGGGCCTTCGTGGTGGTAGCCCTAGTTTAGCAAGAAGATCCGCAACAACAAATACTACTGACACCGTGCCACCACCTTCCCCGGCTGCTTTGAGATCTTCTATGTCTTTGCGGTTGCATTTTCTGCTAAGATTACTGCCTGTCATCTGCAGGGAACCGTCGTTTAGGAACACGAGACACACACTTGCGTCTACTATAGTTCGTCTGCTTGGAAGCAGGGTAGTATATGAAGATTCTGCTGTGTGTTCTCCTCGTAATGACTTATCAAAGTCGGAGACCGAATCAACAACAGATCCATCTCTCATGGCAGATCTTTCTAATGAAATCTTATTTGACCGTTTACTGTTTGTACTCCATGGGCTGTTAAGCAATCACCAGCCAAATTGGCTAAAGCCAAGGTCTTGTTCCTCTAATGAATCATCCAAAGACTTTACCTTTTTTGATCGTGATGCAGCAGAGAGCCTACAGAGTGAGCTTGCGCGGATGCAGTTACCAGAAACCATTAGATGGCGGATTCAAGCAGCGATGCCAACCCTCCTTCCGTCTCTGCGTTGCTCTCTCTCGTGTCAGCCACATTCGGTTCCGCCAACGGCTCTCACACTTGTTCAACCATCGGGATCTTCTGGTCTCAATCAAAGAAACTCCCCTGCCATACCAAAAACCGTAACAGCAGCAGCGCAAGGGAAGTTGAAGCAGACGATGTTGTCACAGTCTCAGCAGCAAGAAGCAGAAAACACGGATGTGGTTGTTGACCCATGGACGCTTTTGGAAGACGGGACGAGCTCAGGTCCATCAAGCAGCAATCCTTCAAACAGCAGTGACATGGGCAATGTTCGAGCCACATGTTGGCTAAAAGGTGCTGTTAGGGTCAGGCGTACTGATCTGACATACATTGGTTCAGTGGATGACGACAGCTGA

Protein:   MQRYHPANCTSAVNNSAVGGGGSSGRSDSSSVGNYSLNSRRPPPLTPYKLKCEKDGLNSRLGPPDFHPPTSTSPEENLTKEYAQSGYKETVDGLKEAEEIILTHVHTFSKPVVIKCKEAVRKCFRAINESRALKRKAGQVYGVPLSGSLLCKPGFPEQRSCGEETKKKWIESLSQQHKRLRSLADNVPGFKRNTLFEVLIRNNVPLPRATWFIKVTYLNQVRPSSASIFSGTPDKTQTTRCEQWTKDVIDYLQYLLNELLSRNNSYPSQQTRDRSPQMLYTGSVQKISPASASLYGEETSLHFKWWYMVRLLQWHLAEGLLLPNLIVDWVLRLLQEKEVFETLQLLLPIVYGVLESIVLSQTYVQNLVAIAVRFIQEPAPGGSDLVDNSRRAYTLSALTEMVRYLVLAAPDTFVASDCFPLPPSIAACGPNDVSYASKAYENLEKLRSNSAEISTQFQGRGVDSRFEFLSFDYTISTVQRTADDLAKIASAGYPQHNGAKAVQALDKALSDGDIRAAYCYLFEDLCNGAVEETWIAEVSPCLRTSLRWIGAISTSFVCSVFFLIEWATCDFRDFRDGVPKDIKFSGRKDCSQVHLVIQLLKQKSLGGKFAARRGKNHHSNFLGVSKPNGSMDPFESPGALHDIIVCWIDQHEVHRGGAKRFQLLVFELIRSGIFNPIAYVRQLILSGMIDVIQPAADPERRLRHHRILKQLPGSFVHDILEEAQLLGGYKLSEAVRIYSNERRLLLRELLVGKRKHFLSDQKSKKKSTSFPLVDLPRTFDAMGDNEGLRKHTKSSVDIRELKERIATVLQFPRMSSGVTNPVPDECQSSVKGSSGSVYSKVDQLEATPGCEDCRKSKRPKMDDEKSSWSSPIISDEEDNWWIKKGLKTVEPSLKVDPPLELTKQVPRGRQKMGRKTQSLAQLQATRIEGSQGTSTSLVCDSKVSCPHHGLGVEGENHWVVDVFRTSTPVDIVSVGNSLKQLQFVDKRSIAVWLTTVVRQLVEESEKSSVRVGQFNKAAPVEESRTTRWKLRADELSAILFLMDLSLDLVLVVKFLLWLLPKGNSSPNFAFQGGRNLLVMPRDVENNTYEVGEAILVSSLRRYENILLSADLIPETMTALMARAASLMSSSGKISGSAALVYARYILKRYGSLPSVVEWHSSFKATCEKRLLSELDHTRPGNSEYGIPLGVPAGVDNPDEYLRKKITRPSRVGLTMREGVQRKVEEATQYLRKLMGTGTMKAPPAEKNDYGYQVAQQIVVGLMDCIRQTGGAAQEGDPSLVSSAVSAIINSIGISMAKNSDLSVHQNHPSGVGSSNIARYVLQIHITCLCLLKEALGERQSRVFEIALATESSTALSGAFAPVKGSRSQHQLSPESYDSNANITTSDMSNGTGKIPLSRGTKVTAAVSALVIGAITHGVITLERIVGLLRLREYLDFVQFVRRTKSSSNGSARSVGASKMENPVEVYVHWFRLLVGNCKTVSEGLVLELVGESSVVAVSRMQRMLPLKLVFPPAYSILAFVLWRPFVSNGNSNSGVHDDTHRLYQSLTMAFHDVIKHLPFRDVCLRDTQGLYELIVADSTDAEFASVLELNGLDMHLKAVAFAPLRARLFLNSLIDCKVPSCGYSHEGVSEAKNRHQGNGTSLVDKLVSVLDSLQPAKFHWQWVELRLLLNEQALTEKLENHDMPLTDAIRSSCPTSEKSEASENEKNFIQILLTRLLVRPDAVPLFSEVVHLFGRSVEESMLKQAEWFLAGHDVLFGRKTIRQKLIIVGESKGLPTKPQFWKPWGWCSNSSSDPIMGNKTAGGKKRKLETVASMEEGEVIEEGLGSKKLLLDEKNRLSVGFGYGVTTERAFVKLVLPCIDQSSDESRSTFVNELVRQFSNIEQQLSSVTNRSSITNTKHMGTASSGSEVSSSKGSTRKGLRGGSPSLARRSATTNTTDTVPPPSPAALRSSMSLRLHFLLRLLPVICREPSFRNTRHTLASTIVRLLGSRVVYEDSAVCSPRNDLSKSETESTTDPSLMADLSNEILFDRLLFVLHGLLSNHQPNWLKPRSCSSNESSKDFTFFDRDAAESLQSELARMQLPETIRWRIQAAMPTLLPSLRCSLSCQPHSVPPTALTLVQPSGSSGLNQRNSPAIPKTVTAAAQGKLKQTMLSQSQQQEAENTDVVVDPWTLLEDGTSSGPSSSNPSNSSDMGNVRATCWLKGAVRVRRTDLTYIGSVDDDS